Selected publications

We publish in the field of basic research in the areas of computational linguistics, information systems, computer vision or machine learning.

  • Paul Grundmann, Tom Oberhauser, Felix Gers, Alexander Löser: Attention Networks for Augmenting Clinical Text with Support Sets for Diagnosis Prediction. COLING 2022
  • Benjamin Winter, Alexei Figueroa, Amy Siu, Felix Gers, Alexander Löser: KIMERA: Injecting Domain Knowledge into Vacant Transformer Heads. LREC 2022
  • Jens-Michalis Papaioannou, Paul Grundmann, Betty van Aken, Athanasios Samaras Ilias Kyparissidis, George Giannakoulas, Felix Gers, Alexander Löser: Cross-Lingual Knowledge Transfer for Clinical Phenotyping. LREC 2022

 

 

2022

     

    2021

    2020

    2019

    2018 and before

    • Scolz M, Widlund PO, Piazza S, Bublik DR, Reber S, Peche LY, Ciani Y, Hubner N, Isokane M, Monte M, Ellenberg J, Hyman AA, Schneider C, Bird AW (2012). GTSE1 is a microtubule plus-end tracking protein that regulates EB1-dependent cell migration. PLoS One; 7(12):e51259.
    • Widlund PO, Podolski M, Reber S, Alper J, Storch M, Hyman AA, Howard J, Drechsel DN (2012). One step purification of assembly-competent tubulin from diverse eukaryotic sources. Mol Biol Cell, 23(22):4393-401.
    • Reber S & Hyman AA (2011). Samurai Sword Sets Spindle Size. Cell, 147(6), 1224-1225.
    • Tang, S, Renz M, Driscoll M, Reber S, Nguyen A, Daniels B, and Lippincott-Schwartz J (2011). Cytoplasmic self-organization of internal membranes, microtubule-and actincytoskeleton inside microfluidics generated droplets. Mol Biol Cell, 22: 8120.
    • Reber S. Isolation of centrosomes from cultured cells (2011). Methods Mol Biol, 777:107-16.
    • Widlund PO, Stear JH, Pozniakovsky A, Zanic M, Reber S, Brouhard GJ, Hyman AA, Howard J (2011). XMAP215 polymerase activity is built by combining multiple tubulin binding TOG domains and a basic lattice-binding region. Proc Natl Acad Sci USA, 15;108(7):2741-6.
    • A. Krueger, A. Merceron, B. Wolf:A Data Model to Ease Analysis and Mining of Educational Data Proc. 3rd International Conference on Educational Data Mining EDM2010, Pittsburgh, USA, June 11-13, pp. 131-140, ISBN: 978-0-615-37529-8.
    • Berger SM, Pesold B, Reber S, Schönig K., Berger AJ, Weidenfeld I. & Bartsch D. (2010). Quantitative analysis of conditional gene inactivation using rationally designed, tetracycline-controlled miRNAs. Nucleic Acids Res, 38(17), e168-e168.
    • Baker, R.S.J.d., Merceron, A., Pavlik, P.I. Jr. (Eds),
      Pittsburgh, PA, USA, June 11-13, 2010, ISBN: 978-0-615-37529-8. Proceedings of the 3rd International Conference on Educational Data Mining EDM2010.
    • Reber S, Over S, Kronja I, Gruss OJ (2008). CaM kinase II initiates meiotic spindle depolymerization independently of APC/C activation. J Cell Biol, 15;183(6):1007-17.
    • Tegha-Dunghu J, Neumann B, Reber S, Krause R, Erfle H, Walter T, ... & Ellenberg J. (2008). EML3 is a nuclear microtubule-binding protein required for the correct alignment of chromosomes in metaphase. J Cell Sci, 121(10), 1718-1726.
    • A. Merceron, K. Yacef: Interestingness Measures for Association Rules in Educational Data Proceedings of the first International Conference on Educational Data Mining (EDM'08), Montreal, Canada, ISBN - 10: 0615306292. Nominated for best paper award.
    • Taxis C, Maeder C, Reber S, Rathfelder N, Miura K, Greger K & Knop M. (2006). Dynamic organization of the actin cytoskeleton during meiosis and spore formation in budding yeast. Traffic, 7(12), 1628-1642.
    • Janke C, Magiera MM, Rathfelder N, Taxis C, Reber S, Maekawa H & Knop M. (2004). A versatile toolbox for PCR‐based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes. Yeast, 21(11), 947-962.
    • Moreno-Borchart AC, Finkbeiner MG, Maier P, Reber S & Knop M. (2003). Function of the yeast spindle pole body during meiotic cell differentiation. Cell Motil Cytoskel, 54, (2)165-165.
    • Felix A. Gers, Nicol N. Schraudolph, Jürgen Schmidhuber: Learning Precise Timing with LSTM Recurrent Networks. Journal of Machine Learning Research 3: 115-143 (2002)

    National conferences


    • Gers F., Bießmann F. Deep Learning im Inverted Classroom Szenario, Berlin Journal of Data Science 2020
    • Florian Stahl, Alexander Löser, Gottfried Vossen: Preismodelle für Datenmarktplätze. Informatik Spektrum 38(2): 133-141 (2015)
    • Herrmann F.; Sauer P.: Fachspezifische 3D-Modelle in Oracle Spatial. DOAG Konferenz, Nürnberg, 2013;
    • Krämer M.; Sauer P.: Integration von Geodaten und Daten des Facility Managements zur Verbesserung der Liegenschaftsverwaltung. In: Angewandte Forschung zur Stadt der Zukunft, Logos Verlag Berlin, S. 49 – 52, 2013
    • Sauer P.; Herrmann F.; Matusewicz J.: Virtuelle Integration von Datenquellen mit einer Graph-Datenbank. Fossgis2014, Berlin, 2014, S. 11 – 14;